mapDamage: tracking and quantifying damage patterns in ancient DNA sequences
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Jul 14, 2025 - Python
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ancient-dna-sequences
Here are 10 public repositories matching this topic...
gargammel is an ancient DNA simulator
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Sep 25, 2026 - C++
A tool to infer metagenomic sample composition
metagenomics falcon compression-algorithm alignment-free ancient-dna-sequences ancientdna falcon-meta
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Oct 10, 2023 - C
Exploration, clustering, visualization and classification of DNA damage patterns
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Jan 15, 2021 - R
Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.
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Mar 27, 2020 - Shell
Metagenomics pipeline for human diet analysis using organelles genomes
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Apr 10, 2018 - Python
An ultra-fast and high-sensitive tool to filter specific DNA content
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Mar 5, 2025 - C
A pipeline to merge ancient DNA sequencing data with modern genotyping data
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Feb 20, 2019 - Perl
A Python tool to create, manage and filter by cross-mappability tracks.
bioinformatics taxonomy metagenomics edna contamination ancient-dna-sequences filtration adna mappability ancient-dna-fragments cross-mappability
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Sep 12, 2026 - Python
ancient population genomics
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Jan 10, 2020 - Scala
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