cdr3

Alignment-free graph models of TCR and BCR repertoires built from Lempel-Ziv and FlashBack string decompositions. Compute sequence generation probability (Pgen) and repertoire diversity, and generate new sequences. Python with a C core.

Identification and quantification of Seq-Well TCR transcripts and their recovered CDR3 sequences.

Анализ последовательностей CDR3 антител

A zero-dependency C++ wrapper for NCBI IgBLAST. Embeds IMGT databases and binaries into a single executable for standalone V(D)J assignment and enriched AIRR-formatted outputs.