multiple-sequence-alignment

Here are 5 public repositories matching this topic...

vinuesa / TIB-filoinfo

Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México

bioinformatics tutorials linux-shell phylogenetics model-selection blast maximum-likelihood phylogenomics bioinformatics-scripts bash-scripting pangenomics multiple-sequence-alignment hmmer3 reciprocal-blast-hits profile-hmms

Updated Oct 29, 2025
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rpianezza / GenomeDelta

Star

Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you need is a reference genome and some short reads

genome fasta fastq bedtools samtools genome-analysis bwa-mem transposons genome-assembly multiple-sequence-alignment transposable-element consensus-sequences

Updated Nov 25, 2024
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ArtemisKotoula / MSA-to-GeneRax

Star

A workflow for gene family tree inference using GeneRax, from multiple sequence alignments.

msa msc-project multiple-sequence-alignment fasttree gene-family-evolution trimal

Updated May 14, 2026
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rajathpatel23 / dna_sequencing_algo

Star

Comparative Analysis of DNA sequencing Algorithm

prefab shell-script fasta dna-sequences multiple-sequence-alignment oxbench

Updated Dec 28, 2020
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vncsmnl / astar_msa

Star

🧮 PA-Star is a software that performs a parallel A-Star search to solve the Multiple Sequence Alignment (MSA) problem. For comparison we also developed a serial version (msa_astar).

portfolio astar-algorithm msa multiple-sequence-alignment master-degree

Updated Aug 22, 2026
Shell

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