mus-musculus

Integrative transcriptomics workflow for therapeutic target discovery using RNA-seq differential expression, functional enrichment, protein-protein interaction network analysis, and structural bioinformatics in Mus musculus (GSE318685).

Repozitorijoje saugomi failai, implementuojantys R Shiny aplikaciją ir leidžiantys vertinti įkeltų genominių duomenų kokybę bei vykdyti biologines analizes.

The repository stores files that were used to perform Tbx5 transcription factor analysis with house mouse heart cells.

A structured collection of transcriptomics pipelines for bulk RNA-seq, single-cell, and spatial analysis across bacteria, plants, fungi, and mammals.

RNA-seq analysis of tumour-associated CD8+ T cells in Mus musculus using DESeq2 and GSEA.

Sleeping is an essential need for animals. Many studies in the past have demonstrated health affections as consequence of sleep deficiency. In this project, RNA-seq analysis allows to compare gene expression in mice among sleep disruption and normal conditions.

The repository stores files that are used to determine homology between Mus musculus and Danio rerio genomes by analyzing synteny blocks.

Code and scripts used for Worth et al. 2022: "Receptor editing constrains development of phosphatidyl choline-specific B cells in VH12-transgenic mice".