VSCode Extension for interactively visualising protein structure data in the editor
In silico protein surgery using ESM.
Explore protein language model embeddings in your browser — surface relationships sequence similarity misses, overlay annotations, and transfer labels (EAT). Nothing uploaded.
React component for visualizing protein structures with the Mol* framework.
Free, open-source 3D molecule viewer in the browser. Open PDB entries, AlphaFold models, PubChem compounds or your own PDB, mmCIF, SDF, MOL and XYZ files. Cartoon, stick and surface views, measurements, a linked sequence viewer, share links and iframe embeds. Built with React Three Fiber.
Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models via MCP. STDIO or Streamable HTTP.
Interactive Protein Sequence Alignment Visualization
A workspace for computational biology — built solo, in public, under MIT.
Molecular structure visualizations with 3Dmol.js in Power BI
PRO-LIFE is a research-oriented platform for protein structure and sequence analysis. It ingests 3D protein coordinates and PDB data, computes geometry metrics with a high-performance C++ engine, visualizes structures in the browser, and provides a baseline machine-learning workflow for ranking candidate protein sequences.
Local-first protein structure viewer for Firefox and Chromium side panels, powered by Mol*.
iOS/Android app for browsing and visualizing protein ligand structures from PDB files. React Native, TypeScript, Express, PostgreSQL
A small web application to pair DNA and RNA bases for the subject of biology.
Utility to parse PDB(Protein Data Bank) file format 3.3 into JSON format
ProteinClaw: An AI Agent driven ecosystem for protein sequence analysis, structure prediction, and bioinformatics workflows.
BioGene - full-stack bioinformatics platform: variant analysis, protein structure, CRISPR design, biomedical NLP, genome browser, LIMS, drug discovery & RNA-seq. React + Express + PostgreSQL.
Browser and desktop app for prepping molecular structures (PDB/mmCIF/STL/3MF) for 3D printing — cavity sealing, print-orientation search, and support-path preview
A protein binding and molecular screening platform
WebGPU molecular viewer for the RCSB PDB — browse, search, and display up to four structures at once, entirely in the browser
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